STRINGSTRING
AGE28134.1 AGE28134.1 AGE28135.1 AGE28135.1 AGE28133.1 AGE28133.1 AGE28137.1 AGE28137.1 icmF icmF AGE25441.1 AGE25441.1 AGE28138.1 AGE28138.1 AGE28140.1 AGE28140.1 AGE25442.1 AGE25442.1 AGE28132.1 AGE28132.1 AGE28139.1 AGE28139.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28134.1Putative phosphatase; COG0631 Serine/threonine protein phosphatase. (239 aa)    
Predicted Functional Partners:
AGE28135.1
Type VI secretion-associated protein TagF; COG3913 Uncharacterized protein conserved in bacteria.
  
 0.983
AGE28133.1
COG0515 Serine/threonine protein kinase.
 
 
 0.969
AGE28137.1
COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.937
icmF
COG3523 Uncharacterized protein conserved in bacteria.
 
  
 0.918
AGE25441.1
COG0631 Serine/threonine protein phosphatase.
  
  
 
0.912
AGE28138.1
COG3522 Uncharacterized protein conserved in bacteria.
 
  
 0.904
AGE28140.1
Type VI secretion protein Fha1; COG3456 Uncharacterized conserved protein, contains FHA domain.
 
  
 0.879
AGE25442.1
Serine-threonine kinase Stk1; COG0515 Serine/threonine protein kinase.
 
 
 0.872
AGE28132.1
Putative ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
  
 0.848
AGE28139.1
Type VI secretion lipoprotein TssJ1; COG3521 Uncharacterized protein conserved in bacteria.
 
  
 0.847
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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