STRINGSTRING
AGE28211.1 AGE28211.1 AGE24301.1 AGE24301.1 AGE27130.1 AGE27130.1 AGE28212.1 AGE28212.1 uvrD uvrD AGE27331.1 AGE27331.1 AGE28844.1 AGE28844.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28211.1COG4395 Uncharacterized protein conserved in bacteria. (290 aa)    
Predicted Functional Partners:
AGE24301.1
COG3028 Uncharacterized protein conserved in bacteria; Belongs to the UPF0307 family.
  
     0.600
AGE27130.1
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.593
AGE28212.1
Hypothetical protein.
       0.548
uvrD
DNA-dependent helicase II; COG0210 Superfamily I DNA and RNA helicases.
       0.514
AGE27331.1
Hypothetical protein.
  
     0.446
AGE28844.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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