STRINGSTRING
AGE28219.1 AGE28219.1 AGE28220.1 AGE28220.1 AGE28218.1 AGE28218.1 dksA-2 dksA-2 AGE28222.1 AGE28222.1 AGE27486.1 AGE27486.1 AGE24542.1 AGE24542.1 AGE28228.1 AGE28228.1 AGE26215.1 AGE26215.1 folE2 folE2 cobW cobW
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGE28219.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
AGE28220.1
CobW/P47K family protein; COG0523 Putative GTPases (G3E family).
 
  
 0.974
AGE28218.1
Putative cibalamin biosynthesis-like protein; COG0523 Putative GTPases (G3E family).
 
  
 0.873
dksA-2
Putative RNA polymerase-binding protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.
  
    0.822
AGE28222.1
Hypothetical protein; COG1391 Glutamine synthetase adenylyltransferase.
  
    0.727
AGE27486.1
Putative cobalamin synthesis-like protein; COG0523 Putative GTPases (G3E family).
 
  
 0.493
AGE24542.1
Putative cobalamin synthesis-like protein; COG0523 Putative GTPases (G3E family).
 
  
 0.491
AGE28228.1
COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily.
  
    0.491
AGE26215.1
C4-type zinc finger protein, DksA/TraR family; COG1734 DnaK suppressor protein.
  
    0.452
folE2
GTP cyclohydrolase; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
    0.437
cobW
Cobalamin biosynthesis protein CobW; COG0523 Putative GTPases (G3E family).
 
  
 0.429
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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