STRINGSTRING
AGE28229.1 AGE28229.1 pyrB pyrB pyrD pyrD carB carB carA carA pyrC pyrC pyrC-2 pyrC-2 AGE28228.1 AGE28228.1 folE2 folE2 AGE27904.1 AGE27904.1 AGE28227.1 AGE28227.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28229.1COG0044 Dihydroorotase and related cyclic amidohydrolases. (445 aa)    
Predicted Functional Partners:
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 0.999
pyrD
Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.978
carB
COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarB family.
 
 
 0.977
carA
COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
 
  
 0.975
pyrC
COG0044 Dihydroorotase and related cyclic amidohydrolases.
  
  
 
0.922
pyrC-2
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
    
 0.919
AGE28228.1
COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily.
 
    0.876
folE2
GTP cyclohydrolase; Converts GTP to 7,8-dihydroneopterin triphosphate.
 
  
 0.872
AGE27904.1
COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase.
 
 
 0.851
AGE28227.1
Putative ABC transporter periplasmic protein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Belongs to the bacterial solute-binding protein 9 family.
     
 0.801
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.