STRINGSTRING
AGE28260.1 AGE28260.1 AGE28261.1 AGE28261.1 AGE26659.1 AGE26659.1 gidB gidB AGE28672.1 AGE28672.1 AGE26304.1 AGE26304.1 mnmG mnmG dnaA dnaA recR recR AGE28546.1 AGE28546.1 xerD xerD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
AGE28260.1Putative chromosome partitioning protein ParB; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (290 aa)    
Predicted Functional Partners:
AGE28261.1
COG1192 ATPases involved in chromosome partitioning.
 
 
 0.981
AGE26659.1
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein; COG1192 ATPases involved in chromosome partitioning.
 
 
 0.910
gidB
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.902
AGE28672.1
Putative chromosome partitioning ParA-like protein; COG1192 ATPases involved in chromosome partitioning.
 
 
 0.870
AGE26304.1
Putative cell division protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
   
 0.801
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
  
  
 0.797
dnaA
Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
  
 0.625
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
     0.606
AGE28546.1
Cell morphology-like protein; COG1192 ATPases involved in chromosome partitioning.
  
 
 0.606
xerD
Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
  
 0.572
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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