STRINGSTRING
AGE28322.1 AGE28322.1 AGE28860.1 AGE28860.1 AGE24774.1 AGE24774.1 AGE27880.1 AGE27880.1 AGE24981.1 AGE24981.1 AGE25658.1 AGE25658.1 AGE24893.1 AGE24893.1 AGE26613.1 AGE26613.1 AGE27379.1 AGE27379.1 trpB trpB trpA trpA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28322.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
AGE28860.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.682
AGE24774.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.680
AGE27880.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.678
AGE24981.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.653
AGE25658.1
COG0583 Transcriptional regulator.
  
     0.653
AGE24893.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.649
AGE26613.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.645
AGE27379.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.645
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
 0.643
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.642
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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