STRINGSTRING
AGE28324.1 AGE28324.1 AGE28323.1 AGE28323.1 AGE28325.1 AGE28325.1 AGE27081.1 AGE27081.1 AGE27421.1 AGE27421.1 AGE25892.1 AGE25892.1 AGE25094.1 AGE25094.1 AGE28791.1 AGE28791.1 AGE28792.1 AGE28792.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28324.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
AGE28323.1
Hypothetical protein.
  
    0.586
AGE28325.1
Hypothetical protein.
  
    0.558
AGE27081.1
COG3237 Uncharacterized protein conserved in bacteria.
   
    0.529
AGE27421.1
Hypothetical protein.
  
    0.504
AGE25892.1
CsbD family protein; Belongs to the UPF0337 (CsbD) family.
   
    0.453
AGE25094.1
Hypothetical protein.
   
    0.441
AGE28791.1
AsmA family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis.
   
    0.433
AGE28792.1
COG2193 Bacterioferritin (cytochrome b1).
   
    0.433
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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