STRINGSTRING
AGE28336.1 AGE28336.1 AGE28335.1 AGE28335.1 AGE28337.1 AGE28337.1 AGE26098.1 AGE26098.1 AGE24390.1 AGE24390.1 AGE27071.1 AGE27071.1 AGE25415.1 AGE25415.1 AGE27116.1 AGE27116.1 AGE28338.1 AGE28338.1 AGE25577.1 AGE25577.1 AGE25904.1 AGE25904.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28336.1COG2303 Choline dehydrogenase and related flavoproteins. (594 aa)    
Predicted Functional Partners:
AGE28335.1
Gluconate 2-dehydrogenase.
 
 0.998
AGE28337.1
Gluconate 2-dehydrogenase cytochrome c subunit; COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.970
AGE26098.1
COG0524 Sugar kinases, ribokinase family.
     
 0.917
AGE24390.1
2-ketogluconate reductase; COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.907
AGE27071.1
Gluconokinase; COG3265 Gluconate kinase.
     
 0.903
AGE25415.1
Putative cytochrome C family protein; COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.874
AGE27116.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.602
AGE28338.1
Radical SAM domain-containing protein; COG1533 DNA repair photolyase.
       0.590
AGE25577.1
COG0477 Permeases of the major facilitator superfamily.
  
     0.589
AGE25904.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.541
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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