STRINGSTRING
AGE28343.1 AGE28343.1 cyoE cyoE AGE28344.1 AGE28344.1 AGE25520.1 AGE25520.1 AGE27327.1 AGE27327.1 AGE25885.1 AGE25885.1 cyoA cyoA petA petA AGE25887.1 AGE25887.1 AGE27338.1 AGE27338.1 AGE28342.1 AGE28342.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE28343.1COG3175 Cytochrome oxidase assembly factor. (190 aa)    
Predicted Functional Partners:
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
 0.984
AGE28344.1
COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
 
 
 0.833
AGE25520.1
COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
 
 
 0.651
AGE27327.1
Cytochrome c, class I; COG3474 Cytochrome c2.
  
  
 0.631
AGE25885.1
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
  
  
 0.594
cyoA
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
  
  
 0.594
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
  
 0.589
AGE25887.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
  
 0.588
AGE27338.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
  
 0.588
AGE28342.1
Hypothetical protein.
 
     0.557
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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