Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGE24280.1 | AGE27238.1 | H045_01020 | H045_15865 | ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B. | Protein disulfide isomerase II; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.429 |
| AGE24280.1 | AGE27292.1 | H045_01020 | H045_16145 | ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B. | COG2976 Uncharacterized protein conserved in bacteria. | 0.736 |
| AGE24280.1 | AGE28358.1 | H045_01020 | H045_21480 | ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B. | COG2863 Cytochrome c553. | 0.411 |
| AGE24280.1 | AGE28359.1 | H045_01020 | H045_21485 | ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B. | Thiol:disulfide interchange protein DsbA; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.689 |
| AGE24280.1 | bamE | H045_01020 | H045_16920 | ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B. | Outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.746 |
| AGE24280.1 | ftsQ | H045_01020 | H045_01480 | ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B. | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.734 |
| AGE24280.1 | lolA | H045_01020 | H045_11190 | ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B. | Lipoprotein chaperone; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.709 |
| AGE24321.1 | AGE27292.1 | H045_01225 | H045_16145 | Putative ABC transporter exported protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | COG2976 Uncharacterized protein conserved in bacteria. | 0.448 |
| AGE24321.1 | AGE28359.1 | H045_01225 | H045_21485 | Putative ABC transporter exported protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | Thiol:disulfide interchange protein DsbA; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.593 |
| AGE24321.1 | bamE | H045_01225 | H045_16920 | Putative ABC transporter exported protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | Outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.510 |
| AGE24321.1 | ftsQ | H045_01225 | H045_01480 | Putative ABC transporter exported protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.482 |
| AGE24321.1 | lolA | H045_01225 | H045_11190 | Putative ABC transporter exported protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | Lipoprotein chaperone; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.430 |
| AGE27238.1 | AGE24280.1 | H045_15865 | H045_01020 | Protein disulfide isomerase II; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B. | 0.429 |
| AGE27238.1 | AGE28359.1 | H045_15865 | H045_21485 | Protein disulfide isomerase II; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Thiol:disulfide interchange protein DsbA; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.626 |
| AGE27238.1 | ftsQ | H045_15865 | H045_01480 | Protein disulfide isomerase II; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.421 |
| AGE27292.1 | AGE24280.1 | H045_16145 | H045_01020 | COG2976 Uncharacterized protein conserved in bacteria. | ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B. | 0.736 |
| AGE27292.1 | AGE24321.1 | H045_16145 | H045_01225 | COG2976 Uncharacterized protein conserved in bacteria. | Putative ABC transporter exported protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component. | 0.448 |
| AGE27292.1 | AGE28359.1 | H045_16145 | H045_21485 | COG2976 Uncharacterized protein conserved in bacteria. | Thiol:disulfide interchange protein DsbA; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.658 |
| AGE27292.1 | bamE | H045_16145 | H045_16920 | COG2976 Uncharacterized protein conserved in bacteria. | Outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.647 |
| AGE27292.1 | ftsQ | H045_16145 | H045_01480 | COG2976 Uncharacterized protein conserved in bacteria. | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.596 |
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