STRINGSTRING
AGE28361.1 AGE28361.1 AGE28360.1 AGE28360.1 AGE24546.1 AGE24546.1 AGE25773.1 AGE25773.1 AGE28544.1 AGE28544.1 AGE25091.1 AGE25091.1 AGE28498.1 AGE28498.1 AGE28359.1 AGE28359.1 AGE25692.1 AGE25692.1 AGE26407.1 AGE26407.1 AGE27823.1 AGE27823.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE28361.1Hypothetical protein; COG2199 FOG: GGDEF domain. (667 aa)    
Predicted Functional Partners:
AGE28360.1
Endonuclease/exonuclease/phosphatase family protein; COG3568 Metal-dependent hydrolase.
  
    0.837
AGE24546.1
Putative signal transduction GGDEF domain-containing membrane protein; COG2199 FOG: GGDEF domain.
 
 
 0.816
AGE25773.1
Cyclic diguanylate phosphodiesterase (EAL) domain-containing protein; COG2200 FOG: EAL domain.
 
  
 0.816
AGE28544.1
Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
 
  
 0.805
AGE25091.1
EAL domain-containing protein; COG2200 FOG: EAL domain.
  
 0.799
AGE28498.1
EAL domain-containing protein; COG2200 FOG: EAL domain.
  
 0.786
AGE28359.1
Thiol:disulfide interchange protein DsbA; COG0526 Thiol-disulfide isomerase and thioredoxins.
       0.785
AGE25692.1
Putative sensory box GGDEF/EAL domain-containing protein; COG0784 FOG: CheY-like receiver.
  
 0.784
AGE26407.1
GAF sensor-containing diguanylate cyclase/phosphodiesterase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
 0.784
AGE27823.1
Putative GGDEF/EAL domain regulatory protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
0.590
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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