STRINGSTRING
AGE28390.1 AGE28390.1 AGE28389.1 AGE28389.1 AGE25904.1 AGE25904.1 AGE26048.1 AGE26048.1 AGE25901.1 AGE25901.1 AGE26047.1 AGE26047.1 AGE25903.1 AGE25903.1 AGE28391.1 AGE28391.1 AGE25905.1 AGE25905.1 fadB fadB AGE28388.1 AGE28388.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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Experiments
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Textmining
[Homology]
Score
AGE28390.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
AGE28389.1
Putative amino acid activating peptide synthase domain protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.946
AGE25904.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.911
AGE26048.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 0.911
AGE25901.1
Putative non-ribosomal antibiotic-related peptide synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.852
AGE26047.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.840
AGE25903.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.837
AGE28391.1
Hypothetical protein.
       0.800
AGE25905.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.769
fadB
Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.546
AGE28388.1
Hypothetical protein.
     
 0.529
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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