STRINGSTRING
AGE28444.1 AGE28444.1 AGE28445.1 AGE28445.1 AGE28443.1 AGE28443.1 AGE26887.1 AGE26887.1 AGE28438.1 AGE28438.1 AGE27278.1 AGE27278.1 AGE24134.1 AGE24134.1 AGE24594.1 AGE24594.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28444.1Putative lipoprotein; COG4259 Uncharacterized protein conserved in bacteria. (120 aa)    
Predicted Functional Partners:
AGE28445.1
COG4380 Uncharacterized protein conserved in bacteria.
 
    0.982
AGE28443.1
Putative lipoprotein; COG1462 Uncharacterized protein involved in formation of curli polymers.
 
    0.972
AGE26887.1
DNA-binding protein; COG1396 Predicted transcriptional regulators.
  
     0.537
AGE28438.1
Putative adhesin; COG3210 Large exoproteins involved in heme utilization or adhesion.
 
     0.518
AGE27278.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.487
AGE24134.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.480
AGE24594.1
Glutamate/aspartate ABC transporter periplasmic binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.426
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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