STRINGSTRING
AGE28454.1 AGE28454.1 AGE25692.1 AGE25692.1 AGE26528.1 AGE26528.1 AGE25773.1 AGE25773.1 AGE25693.1 AGE25693.1 AGE28498.1 AGE28498.1 AGE24544.1 AGE24544.1 AGE24546.1 AGE24546.1 AGE26407.1 AGE26407.1 AGE28544.1 AGE28544.1 AGE25091.1 AGE25091.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE28454.1Hypothetical protein; COG2202 FOG: PAS/PAC domain. (333 aa)    
Predicted Functional Partners:
AGE25692.1
Putative sensory box GGDEF/EAL domain-containing protein; COG0784 FOG: CheY-like receiver.
 
 0.986
AGE26528.1
Sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
  
 
 0.928
AGE25773.1
Cyclic diguanylate phosphodiesterase (EAL) domain-containing protein; COG2200 FOG: EAL domain.
 
 0.919
AGE25693.1
Putative two-component response regulator transcriptional regulatory protein; COG0784 FOG: CheY-like receiver.
  
 
 0.875
AGE28498.1
EAL domain-containing protein; COG2200 FOG: EAL domain.
 
 0.874
AGE24544.1
Putative signal transduction GGDEF domain-containing membrane protein; COG2199 FOG: GGDEF domain.
 
 0.867
AGE24546.1
Putative signal transduction GGDEF domain-containing membrane protein; COG2199 FOG: GGDEF domain.
 
 0.867
AGE26407.1
GAF sensor-containing diguanylate cyclase/phosphodiesterase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 0.866
AGE28544.1
Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
 
 
 0.859
AGE25091.1
EAL domain-containing protein; COG2200 FOG: EAL domain.
 
 0.835
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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