STRINGSTRING
AGE28469.1 AGE28469.1 AGE24415.1 AGE24415.1 AGE28470.1 AGE28470.1 AGE28471.1 AGE28471.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28469.1Major facilitator family transporter; COG2807 Cyanate permease. (395 aa)    
Predicted Functional Partners:
AGE24415.1
COG3022 Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family.
 
    0.611
AGE28470.1
Hypothetical protein; COG3545 Predicted esterase of the alpha/beta hydrolase fold.
       0.506
AGE28471.1
Sigma-54-binding protein; COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain.
       0.417
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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