STRINGSTRING
AGE28470.1 AGE28470.1 AGE28471.1 AGE28471.1 AGE28796.1 AGE28796.1 AGE28469.1 AGE28469.1 AGE28472.1 AGE28472.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28470.1Hypothetical protein; COG3545 Predicted esterase of the alpha/beta hydrolase fold. (193 aa)    
Predicted Functional Partners:
AGE28471.1
Sigma-54-binding protein; COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain.
       0.650
AGE28796.1
Heat shock protein, Hsp70 family; COG0443 Molecular chaperone.
  
     0.559
AGE28469.1
Major facilitator family transporter; COG2807 Cyanate permease.
       0.506
AGE28472.1
Lipoprotein, NLPA family; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen.
  
    0.437
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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