Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE28469.1 | AGE28470.1 | H045_22045 | H045_22050 | Major facilitator family transporter; COG2807 Cyanate permease. | Hypothetical protein; COG3545 Predicted esterase of the alpha/beta hydrolase fold. | 0.506 |
AGE28469.1 | AGE28471.1 | H045_22045 | H045_22055 | Major facilitator family transporter; COG2807 Cyanate permease. | Sigma-54-binding protein; COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain. | 0.417 |
AGE28470.1 | AGE28469.1 | H045_22050 | H045_22045 | Hypothetical protein; COG3545 Predicted esterase of the alpha/beta hydrolase fold. | Major facilitator family transporter; COG2807 Cyanate permease. | 0.506 |
AGE28470.1 | AGE28471.1 | H045_22050 | H045_22055 | Hypothetical protein; COG3545 Predicted esterase of the alpha/beta hydrolase fold. | Sigma-54-binding protein; COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain. | 0.650 |
AGE28470.1 | AGE28472.1 | H045_22050 | H045_22060 | Hypothetical protein; COG3545 Predicted esterase of the alpha/beta hydrolase fold. | Lipoprotein, NLPA family; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen. | 0.437 |
AGE28470.1 | AGE28796.1 | H045_22050 | H045_23690 | Hypothetical protein; COG3545 Predicted esterase of the alpha/beta hydrolase fold. | Heat shock protein, Hsp70 family; COG0443 Molecular chaperone. | 0.559 |
AGE28471.1 | AGE28469.1 | H045_22055 | H045_22045 | Sigma-54-binding protein; COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain. | Major facilitator family transporter; COG2807 Cyanate permease. | 0.417 |
AGE28471.1 | AGE28470.1 | H045_22055 | H045_22050 | Sigma-54-binding protein; COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain. | Hypothetical protein; COG3545 Predicted esterase of the alpha/beta hydrolase fold. | 0.650 |
AGE28471.1 | AGE28472.1 | H045_22055 | H045_22060 | Sigma-54-binding protein; COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain. | Lipoprotein, NLPA family; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen. | 0.522 |
AGE28472.1 | AGE28470.1 | H045_22060 | H045_22050 | Lipoprotein, NLPA family; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen. | Hypothetical protein; COG3545 Predicted esterase of the alpha/beta hydrolase fold. | 0.437 |
AGE28472.1 | AGE28471.1 | H045_22060 | H045_22055 | Lipoprotein, NLPA family; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen. | Sigma-54-binding protein; COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain. | 0.522 |
AGE28796.1 | AGE28470.1 | H045_23690 | H045_22050 | Heat shock protein, Hsp70 family; COG0443 Molecular chaperone. | Hypothetical protein; COG3545 Predicted esterase of the alpha/beta hydrolase fold. | 0.559 |