STRINGSTRING
AGE28544.1 AGE28544.1 AGE28545.1 AGE28545.1 AGE24881.1 AGE24881.1 AGE28454.1 AGE28454.1 AGE26284.1 AGE26284.1 AGE27332.1 AGE27332.1 AGE27823.1 AGE27823.1 AGE28689.1 AGE28689.1 AGE28361.1 AGE28361.1 AGE25091.1 AGE25091.1 AGE25556.1 AGE25556.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE28544.1Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain. (648 aa)    
Predicted Functional Partners:
AGE28545.1
COG3672 Predicted periplasmic protein.
 
 
 0.967
AGE24881.1
COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 
 0.928
AGE28454.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
 
 
 0.859
AGE26284.1
Sensor protein GacS; COG0642 Signal transduction histidine kinase.
  
  
 0.852
AGE27332.1
Sensory box containing diguanylate cyclase (GGDEF) domain protein; COG2202 FOG: PAS/PAC domain.
 
 
 0.850
AGE27823.1
Putative GGDEF/EAL domain regulatory protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
0.827
AGE28689.1
Sensory box-containing diguanylate cyclase; COG2199 FOG: GGDEF domain.
 
 
0.816
AGE28361.1
Hypothetical protein; COG2199 FOG: GGDEF domain.
 
  
 0.805
AGE25091.1
EAL domain-containing protein; COG2200 FOG: EAL domain.
 
  
 0.803
AGE25556.1
Putative GGDEF domain signaling protein; COG2199 FOG: GGDEF domain.
 
  
 0.798
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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