STRINGSTRING
waaC waaC waaF waaF AGE28695.1 AGE28695.1 AGE28696.1 AGE28696.1 AGE28718.1 AGE28718.1 AGE28699.1 AGE28699.1 AGE28698.1 AGE28698.1 nuoC nuoC hldE hldE AGE28697.1 AGE28697.1 AGE28294.1 AGE28294.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
waaCLipopolysaccharide heptosyltransferase I; COG0859 ADP-heptose:LPS heptosyltransferase. (353 aa)    
Predicted Functional Partners:
waaF
Lipopolysaccharide heptosyltransferase II; COG0859 ADP-heptose:LPS heptosyltransferase.
 
0.997
AGE28695.1
Lipopolysaccharide core biosynthesis protein; COG0438 Glycosyltransferase.
 
 
 0.993
AGE28696.1
Lipopolysaccharide core heptose(I) kinase RfaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
 
 0.992
AGE28718.1
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
  
 0.975
AGE28699.1
COG0515 Serine/threonine protein kinase.
 
 
 
 0.923
AGE28698.1
Putative lipopolysaccharide biosynthesis-like protein.
 
 
 0.921
nuoC
Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
    
 
 0.893
hldE
Bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.867
AGE28697.1
Putative lipopolysaccharide core biosynthesis protein; COG0515 Serine/threonine protein kinase.
 
     0.865
AGE28294.1
D,D-heptose 1,7-bisphosphate phosphatase; COG0241 Histidinol phosphatase and related phosphatases.
 
   
 0.843
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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