STRINGSTRING
AGE28696.1 AGE28696.1 AGE28695.1 AGE28695.1 waaC waaC waaF waaF AGE28698.1 AGE28698.1 AGE28699.1 AGE28699.1 AGE28697.1 AGE28697.1 AGE28718.1 AGE28718.1 AGE27215.1 AGE27215.1 AGE28710.1 AGE28710.1 AGE28705.1 AGE28705.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AGE28696.1Lipopolysaccharide core heptose(I) kinase RfaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family. (268 aa)    
Predicted Functional Partners:
AGE28695.1
Lipopolysaccharide core biosynthesis protein; COG0438 Glycosyltransferase.
 
 
 0.997
waaC
Lipopolysaccharide heptosyltransferase I; COG0859 ADP-heptose:LPS heptosyltransferase.
 
 
 0.992
waaF
Lipopolysaccharide heptosyltransferase II; COG0859 ADP-heptose:LPS heptosyltransferase.
 
 
 0.989
AGE28698.1
Putative lipopolysaccharide biosynthesis-like protein.
 
 
 0.962
AGE28699.1
COG0515 Serine/threonine protein kinase.
 
 
 0.959
AGE28697.1
Putative lipopolysaccharide core biosynthesis protein; COG0515 Serine/threonine protein kinase.
 
     0.951
AGE28718.1
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
 0.913
AGE27215.1
InaA protein.
 
 
 0.805
AGE28710.1
Hypothetical protein; COG3642 Mn2+-dependent serine/threonine protein kinase.
 
 
 0.801
AGE28705.1
Carbamoyltransferase; COG2192 Predicted carbamoyl transferase, NodU family.
 
  
 0.789
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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