STRINGSTRING
AGE28705.1 AGE28705.1 AGE28707.1 AGE28707.1 AGE28706.1 AGE28706.1 AGE28696.1 AGE28696.1 AGE28699.1 AGE28699.1 AGE28695.1 AGE28695.1 AGE28708.1 AGE28708.1 AGE28697.1 AGE28697.1 AGE28698.1 AGE28698.1 AGE28710.1 AGE28710.1 AGE27215.1 AGE27215.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28705.1Carbamoyltransferase; COG2192 Predicted carbamoyl transferase, NodU family. (585 aa)    
Predicted Functional Partners:
AGE28707.1
Putative deacetylase; COG2120 Uncharacterized proteins, LmbE homologs.
 
   
 0.850
AGE28706.1
Hypothetical protein.
     
 0.815
AGE28696.1
Lipopolysaccharide core heptose(I) kinase RfaP; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
  
 0.789
AGE28699.1
COG0515 Serine/threonine protein kinase.
 
   
 0.786
AGE28695.1
Lipopolysaccharide core biosynthesis protein; COG0438 Glycosyltransferase.
 
   
 0.784
AGE28708.1
COG0438 Glycosyltransferase.
 
  
 0.780
AGE28697.1
Putative lipopolysaccharide core biosynthesis protein; COG0515 Serine/threonine protein kinase.
 
   
 0.777
AGE28698.1
Putative lipopolysaccharide biosynthesis-like protein.
 
   
 0.753
AGE28710.1
Hypothetical protein; COG3642 Mn2+-dependent serine/threonine protein kinase.
 
     0.749
AGE27215.1
InaA protein.
 
     0.702
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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