Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE24336.1 | AGE24409.1 | H045_01300 | H045_01665 | Lipoprotein. | poly(beta-D-mannuronate) C5 epimerase AlgG. | 0.581 |
AGE24336.1 | AGE24717.1 | H045_01300 | H045_03205 | Lipoprotein. | COG2825 Outer membrane protein. | 0.547 |
AGE24336.1 | AGE25236.1 | H045_01300 | H045_05810 | Lipoprotein. | Hypothetical protein. | 0.638 |
AGE24336.1 | AGE25759.1 | H045_01300 | H045_08445 | Lipoprotein. | Hypothetical protein. | 0.495 |
AGE24336.1 | AGE26951.1 | H045_01300 | H045_14430 | Lipoprotein. | Putative lipoprotein. | 0.602 |
AGE24336.1 | AGE28707.1 | H045_01300 | H045_23245 | Lipoprotein. | Putative deacetylase; COG2120 Uncharacterized proteins, LmbE homologs. | 0.741 |
AGE24336.1 | AGE28730.1 | H045_01300 | H045_23360 | Lipoprotein. | Putative lipoprotein; COG3009 Uncharacterized protein conserved in bacteria. | 0.412 |
AGE24409.1 | AGE24336.1 | H045_01665 | H045_01300 | poly(beta-D-mannuronate) C5 epimerase AlgG. | Lipoprotein. | 0.581 |
AGE24409.1 | AGE24717.1 | H045_01665 | H045_03205 | poly(beta-D-mannuronate) C5 epimerase AlgG. | COG2825 Outer membrane protein. | 0.444 |
AGE24409.1 | AGE25236.1 | H045_01665 | H045_05810 | poly(beta-D-mannuronate) C5 epimerase AlgG. | Hypothetical protein. | 0.766 |
AGE24409.1 | AGE26951.1 | H045_01665 | H045_14430 | poly(beta-D-mannuronate) C5 epimerase AlgG. | Putative lipoprotein. | 0.743 |
AGE24409.1 | AGE28707.1 | H045_01665 | H045_23245 | poly(beta-D-mannuronate) C5 epimerase AlgG. | Putative deacetylase; COG2120 Uncharacterized proteins, LmbE homologs. | 0.749 |
AGE24409.1 | AGE28730.1 | H045_01665 | H045_23360 | poly(beta-D-mannuronate) C5 epimerase AlgG. | Putative lipoprotein; COG3009 Uncharacterized protein conserved in bacteria. | 0.623 |
AGE24717.1 | AGE24336.1 | H045_03205 | H045_01300 | COG2825 Outer membrane protein. | Lipoprotein. | 0.547 |
AGE24717.1 | AGE24409.1 | H045_03205 | H045_01665 | COG2825 Outer membrane protein. | poly(beta-D-mannuronate) C5 epimerase AlgG. | 0.444 |
AGE24717.1 | AGE25236.1 | H045_03205 | H045_05810 | COG2825 Outer membrane protein. | Hypothetical protein. | 0.617 |
AGE24717.1 | AGE25759.1 | H045_03205 | H045_08445 | COG2825 Outer membrane protein. | Hypothetical protein. | 0.489 |
AGE24717.1 | AGE26951.1 | H045_03205 | H045_14430 | COG2825 Outer membrane protein. | Putative lipoprotein. | 0.651 |
AGE24717.1 | AGE28707.1 | H045_03205 | H045_23245 | COG2825 Outer membrane protein. | Putative deacetylase; COG2120 Uncharacterized proteins, LmbE homologs. | 0.742 |
AGE25236.1 | AGE24336.1 | H045_05810 | H045_01300 | Hypothetical protein. | Lipoprotein. | 0.638 |
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