STRINGSTRING
AGE28708.1 AGE28708.1 AGE28709.1 AGE28709.1 AGE28705.1 AGE28705.1 AGE28707.1 AGE28707.1 AGE28706.1 AGE28706.1 AGE28713.1 AGE28713.1 AGE25021.1 AGE25021.1 AGE25011.1 AGE25011.1 AGE25012.1 AGE25012.1 glgB glgB treZ treZ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE28708.1COG0438 Glycosyltransferase. (382 aa)    
Predicted Functional Partners:
AGE28709.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.859
AGE28705.1
Carbamoyltransferase; COG2192 Predicted carbamoyl transferase, NodU family.
 
  
 0.780
AGE28707.1
Putative deacetylase; COG2120 Uncharacterized proteins, LmbE homologs.
 
  
 0.746
AGE28706.1
Hypothetical protein.
  
  
 0.722
AGE28713.1
Putative lipopolysaccharide biosynthesis-related epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
  
 0.706
AGE25021.1
Undecaprenyl-phosphate galactose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.656
AGE25011.1
UDP-glucose/GDP-mannose dehydrogenase-like protein; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase.
 
  
 0.575
AGE25012.1
WbpP; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
  
 0.568
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.534
treZ
Putative trehalose trehalohydrolase protein; COG0296 1,4-alpha-glucan branching enzyme.
   
 0.534
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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