STRINGSTRING
msbA msbA AGE28710.1 AGE28710.1 AGE24487.1 AGE24487.1 AGE25901.1 AGE25901.1 AGE25904.1 AGE25904.1 AGE26048.1 AGE26048.1 AGE28540.1 AGE28540.1 AGE25903.1 AGE25903.1 hldE hldE dnaK dnaK AGE28277.1 AGE28277.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msbALipid A export ATP-binding/permease protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (601 aa)    
Predicted Functional Partners:
AGE28710.1
Hypothetical protein; COG3642 Mn2+-dependent serine/threonine protein kinase.
 
 0.762
AGE24487.1
Oligopeptide/dipeptide ABC transporter ATP-binding protein; COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
    
0.759
AGE25901.1
Putative non-ribosomal antibiotic-related peptide synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
  
 
 0.729
AGE25904.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.666
AGE26048.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.666
AGE28540.1
Type I toxin efflux ATP-binding protein; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
 
 
0.645
AGE25903.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.638
hldE
Bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
   
 0.632
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.598
AGE28277.1
ATPase central domain-containing protein; COG0464 ATPases of the AAA+ class.
 
 
 0.591
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.