Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGE24457.1 | pgsA | H045_01905 | H045_06445 | Phosphatidylserine synthase, putative; COG1183 Phosphatidylserine synthase. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.921 |
AGE24457.1 | psd | H045_01905 | H045_23375 | Phosphatidylserine synthase, putative; COG1183 Phosphatidylserine synthase. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.926 |
AGE24457.1 | pssA | H045_01905 | H045_07605 | Phosphatidylserine synthase, putative; COG1183 Phosphatidylserine synthase. | COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes. | 0.905 |
AGE24457.1 | pssA-2 | H045_01905 | H045_16655 | Phosphatidylserine synthase, putative; COG1183 Phosphatidylserine synthase. | CDP-diacylglycerol--serine O-phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.920 |
AGE25336.1 | betA | H045_06310 | H045_18745 | COG2303 Choline dehydrogenase and related flavoproteins. | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | 0.913 |
AGE25336.1 | psd | H045_06310 | H045_23375 | COG2303 Choline dehydrogenase and related flavoproteins. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.801 |
AGE28734.1 | AGE28735.1 | H045_23380 | H045_23385 | COG2897 Rhodanese-related sulfurtransferase. | Hypothetical protein. | 0.654 |
AGE28734.1 | motA | H045_23380 | H045_23390 | COG2897 Rhodanese-related sulfurtransferase. | COG1291 Flagellar motor component. | 0.481 |
AGE28734.1 | psd | H045_23380 | H045_23375 | COG2897 Rhodanese-related sulfurtransferase. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.792 |
AGE28735.1 | AGE28734.1 | H045_23385 | H045_23380 | Hypothetical protein. | COG2897 Rhodanese-related sulfurtransferase. | 0.654 |
AGE28735.1 | motA | H045_23385 | H045_23390 | Hypothetical protein. | COG1291 Flagellar motor component. | 0.572 |
AGE28735.1 | psd | H045_23385 | H045_23375 | Hypothetical protein. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.641 |
betA | AGE25336.1 | H045_18745 | H045_06310 | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | COG2303 Choline dehydrogenase and related flavoproteins. | 0.913 |
betA | psd | H045_18745 | H045_23375 | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.801 |
motA | AGE28734.1 | H045_23390 | H045_23380 | COG1291 Flagellar motor component. | COG2897 Rhodanese-related sulfurtransferase. | 0.481 |
motA | AGE28735.1 | H045_23390 | H045_23385 | COG1291 Flagellar motor component. | Hypothetical protein. | 0.572 |
motA | psd | H045_23390 | H045_23375 | COG1291 Flagellar motor component. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.467 |
pgsA | AGE24457.1 | H045_06445 | H045_01905 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Phosphatidylserine synthase, putative; COG1183 Phosphatidylserine synthase. | 0.921 |
pgsA | psd | H045_06445 | H045_23375 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.527 |
pgsA | pssA | H045_06445 | H045_07605 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes. | 0.921 |
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