STRINGSTRING
cueR cueR AGE28855.1 AGE28855.1 rpoD rpoD AGE28856.1 AGE28856.1 dnaJ dnaJ AGE28797.1 AGE28797.1 AGE26528.1 AGE26528.1 AGE28857.1 AGE28857.1 AGE25693.1 AGE25693.1 AGE25784.1 AGE25784.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
cueRCOG0789 Predicted transcriptional regulators. (133 aa)    
Predicted Functional Partners:
AGE28855.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
 
  
 0.894
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
 
 0.611
AGE28856.1
Hypothetical protein.
       0.605
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
  
 
 0.514
AGE28797.1
Curved DNA-binding protein; COG2214 DnaJ-class molecular chaperone.
  
 
 0.514
AGE26528.1
Sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 
 0.455
AGE28857.1
Bcr/CflA family multidrug resistance transporter; COG0477 Permeases of the major facilitator superfamily.
     
 0.425
AGE25693.1
Putative two-component response regulator transcriptional regulatory protein; COG0784 FOG: CheY-like receiver.
   
 
 0.416
AGE25784.1
Putative two-component system histidine kinase/response regulator fusion; COG0642 Signal transduction histidine kinase.
   
 
 0.411
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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