STRINGSTRING
AGE28867.1 AGE28867.1 AGE28868.1 AGE28868.1 AGE28866.1 AGE28866.1 AGE28869.1 AGE28869.1 AGE28865.1 AGE28865.1 AGE26561.1 AGE26561.1 AGE28870.1 AGE28870.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGE28867.1Thymidylate synthase. (193 aa)    
Predicted Functional Partners:
AGE28868.1
COG1309 Transcriptional regulator.
       0.785
AGE28866.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.649
AGE28869.1
High-affinity xanthine transporter, NCS2 family, YicE; COG2233 Xanthine/uracil permeases.
       0.556
AGE28865.1
Hydroxydechloroatrazine ethylaminohydrolase; COG0402 Cytosine deaminase and related metal-dependent hydrolases.
       0.422
AGE26561.1
Hypothetical protein; COG2384 Predicted SAM-dependent methyltransferase.
   
    0.410
AGE28870.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.406
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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