STRINGSTRING
AGE28870.1 AGE28870.1 AGE28871.1 AGE28871.1 AGE25330.1 AGE25330.1 AGE28313.1 AGE28313.1 AGE26613.1 AGE26613.1 AGE25230.1 AGE25230.1 AGE27880.1 AGE27880.1 AGE25408.1 AGE25408.1 AGE28775.1 AGE28775.1 AGE28869.1 AGE28869.1 mmsA-3 mmsA-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGE28870.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (306 aa)    
Predicted Functional Partners:
AGE28871.1
Beta alanine--pyruvate transaminase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.784
AGE25330.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
   
 0.693
AGE28313.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.669
AGE26613.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.635
AGE25230.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.603
AGE27880.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.585
AGE25408.1
COG0583 Transcriptional regulator.
  
     0.571
AGE28775.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.565
AGE28869.1
High-affinity xanthine transporter, NCS2 family, YicE; COG2233 Xanthine/uracil permeases.
       0.559
mmsA-3
COG1012 NAD-dependent aldehyde dehydrogenases.
 
     0.551
Your Current Organism:
Pseudomonas poae
NCBI taxonomy Id: 1282356
Other names: P. poae RE*1-1-14, Pseudomonas poae RE*1-1-14
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