STRINGSTRING
AGI21932.1 AGI21932.1 AGI21931.1 AGI21931.1 AGI21933.1 AGI21933.1 AGI21934.1 AGI21934.1 AGI21930.1 AGI21930.1 AGI21935.1 AGI21935.1 AGI22624.1 AGI22624.1 AGI21938.1 AGI21938.1 putA putA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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Textmining
[Homology]
Score
AGI21932.1Ectoine utilization protein EutC; COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog. (330 aa)    
Predicted Functional Partners:
AGI21931.1
Ectoine utilization protein EutB; COG1171 Threonine dehydratase.
 
  
 0.907
AGI21933.1
Ectoine utilization protein EutD; COG0006 Xaa-Pro aminopeptidase.
 
  
 0.878
AGI21934.1
Ectoine utilization protein EutE; COG3608 Predicted deacylase.
 
   
 0.797
AGI21930.1
COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
 
   
 0.679
AGI21935.1
COG1522 Transcriptional regulators.
 
   
 0.621
AGI22624.1
COG3938 Proline racemase; Belongs to the proline racemase family.
 
   
 0.522
AGI21938.1
Hypothetical protein; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.493
putA
Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.482
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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