STRINGSTRING
AGI21964.1 AGI21964.1 trpA trpA trpB trpB AGI26850.1 AGI26850.1 AGI23587.1 AGI23587.1 AGI25773.1 AGI25773.1 AGI21965.1 AGI21965.1 AGI21979.1 AGI21979.1 AGI23896.1 AGI23896.1 AGI25227.1 AGI25227.1 AGI23162.1 AGI23162.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI21964.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
 
   
 0.668
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
 0.628
AGI26850.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.584
AGI23587.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.576
AGI25773.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.573
AGI21965.1
Hypothetical protein.
       0.572
AGI21979.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.572
AGI23896.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.554
AGI25227.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.553
AGI23162.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.547
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.