STRINGSTRING
AGI21979.1 AGI21979.1 AGI24769.1 AGI24769.1 AGI26680.1 AGI26680.1 AGI24733.1 AGI24733.1 AGI23893.1 AGI23893.1 AGI24790.1 AGI24790.1 AGI23186.1 AGI23186.1 AGI23279.1 AGI23279.1 AGI24502.1 AGI24502.1 AGI21978.1 AGI21978.1 AGI26381.1 AGI26381.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Textmining
[Homology]
Score
AGI21979.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (308 aa)    
Predicted Functional Partners:
AGI24769.1
Transcriptional Regulator, LysR family; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.748
AGI26680.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.729
AGI24733.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.725
AGI23893.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.682
AGI24790.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.669
AGI23186.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.664
AGI23279.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.655
AGI24502.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.637
AGI21978.1
Hypothetical protein; COG2153 Predicted acyltransferase.
       0.636
AGI26381.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.632
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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