STRINGSTRING
gmd gmd AGI21999.1 AGI21999.1 AGI21997.1 AGI21997.1 AGI25763.1 AGI25763.1 AGI26623.1 AGI26623.1 AGI25752.1 AGI25752.1 AGI22002.1 AGI22002.1 AGI22000.1 AGI22000.1 AGI22003.1 AGI22003.1 AGI22004.1 AGI22004.1 AGI22001.1 AGI22001.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (323 aa)    
Predicted Functional Partners:
AGI21999.1
Phosphomannose isomerase/GDP-mannose WbpW; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.995
AGI21997.1
Oxidoreductase; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
  
 
0.984
AGI25763.1
Phosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.980
AGI26623.1
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.961
AGI25752.1
COG1004 Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.937
AGI22002.1
COG0438 Glycosyltransferase.
 
  
 0.885
AGI22000.1
ABC transporter permease; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.876
AGI22003.1
COG0438 Glycosyltransferase.
 
  
 0.863
AGI22004.1
COG0438 Glycosyltransferase.
 
  
 0.854
AGI22001.1
ABC transporter ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
   
 0.803
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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