STRINGSTRING
AGI22015.1 AGI22015.1 AGI22013.1 AGI22013.1 AGI22014.1 AGI22014.1 AGI22977.1 AGI22977.1 AGI22012.1 AGI22012.1 AGI25911.1 AGI25911.1 AGI22171.1 AGI22171.1 AGI25107.1 AGI25107.1 AGI25838.1 AGI25838.1 AGI25192.1 AGI25192.1 AGI24018.1 AGI24018.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22015.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
AGI22013.1
Hypothetical protein.
 
     0.799
AGI22014.1
Hypothetical protein.
 
     0.764
AGI22977.1
COG3105 Uncharacterized protein conserved in bacteria.
  
     0.718
AGI22012.1
COG1612 Uncharacterized protein required for cytochrome oxidase assembly.
 
    0.711
AGI25911.1
Hypothetical protein.
  
     0.693
AGI22171.1
Hypothetical protein.
  
     0.660
AGI25107.1
Hypothetical protein.
  
     0.608
AGI25838.1
COG3141 Uncharacterized protein conserved in bacteria.
  
     0.605
AGI25192.1
Hypothetical protein.
  
     0.600
AGI24018.1
COG3313 Predicted Fe-S protein.
  
     0.592
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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