Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGI22010.1 | AGI22012.1 | H681_00640 | H681_00650 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | 0.784 |
| AGI22010.1 | AGI22013.1 | H681_00640 | H681_00655 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Hypothetical protein. | 0.502 |
| AGI22010.1 | AGI22014.1 | H681_00640 | H681_00660 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Hypothetical protein. | 0.744 |
| AGI22010.1 | AGI22016.1 | H681_00640 | H681_00670 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.476 |
| AGI22010.1 | AGI22017.1 | H681_00640 | H681_00675 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | COG3175 Cytochrome oxidase assembly factor. | 0.697 |
| AGI22010.1 | AGI22018.1 | H681_00640 | H681_00680 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Cytochrome-c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.500 |
| AGI22010.1 | AGI22019.1 | H681_00640 | H681_00685 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.856 |
| AGI22010.1 | AGI22849.1 | H681_00640 | H681_04845 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. | 0.648 |
| AGI22010.1 | cyoE | H681_00640 | H681_00645 | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.762 |
| AGI22012.1 | AGI22010.1 | H681_00650 | H681_00640 | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | 0.784 |
| AGI22012.1 | AGI22013.1 | H681_00650 | H681_00655 | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | Hypothetical protein. | 0.963 |
| AGI22012.1 | AGI22014.1 | H681_00650 | H681_00660 | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | Hypothetical protein. | 0.984 |
| AGI22012.1 | AGI22016.1 | H681_00650 | H681_00670 | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | 0.849 |
| AGI22012.1 | AGI22017.1 | H681_00650 | H681_00675 | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | COG3175 Cytochrome oxidase assembly factor. | 0.991 |
| AGI22012.1 | AGI22018.1 | H681_00650 | H681_00680 | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | Cytochrome-c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.843 |
| AGI22012.1 | AGI22019.1 | H681_00650 | H681_00685 | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.912 |
| AGI22012.1 | cyoE | H681_00650 | H681_00645 | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.996 |
| AGI22012.1 | cyoE-2 | H681_00650 | H681_04865 | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.974 |
| AGI22013.1 | AGI22010.1 | H681_00655 | H681_00640 | Hypothetical protein. | COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. | 0.502 |
| AGI22013.1 | AGI22012.1 | H681_00655 | H681_00650 | Hypothetical protein. | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | 0.963 |
page 1 of 6