STRINGSTRING
AGI22030.1 AGI22030.1 AGI22031.1 AGI22031.1 AGI22032.1 AGI22032.1 AGI24440.1 AGI24440.1 AGI21953.1 AGI21953.1 AGI24733.1 AGI24733.1 AGI22052.1 AGI22052.1 AGI24790.1 AGI24790.1 AGI26439.1 AGI26439.1 AGI23413.1 AGI23413.1 AGI24541.1 AGI24541.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22030.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (306 aa)    
Predicted Functional Partners:
AGI22031.1
Beta alanine--pyruvate transaminase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.799
AGI22032.1
Cupin 2 protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
  
    0.559
AGI24440.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.521
AGI21953.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.508
AGI24733.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.458
AGI22052.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.433
AGI24790.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.431
AGI26439.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.422
AGI23413.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.417
AGI24541.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.416
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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