STRINGSTRING
AGI22032.1 AGI22032.1 AGI22031.1 AGI22031.1 AGI22033.1 AGI22033.1 AGI22030.1 AGI22030.1 AGI25889.1 AGI25889.1 AGI23154.1 AGI23154.1 AGI26889.1 AGI26889.1 AGI24182.1 AGI24182.1 AGI26383.1 AGI26383.1 AGI24804.1 AGI24804.1 AGI26221.1 AGI26221.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGI22032.1Cupin 2 protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. (97 aa)    
Predicted Functional Partners:
AGI22031.1
Beta alanine--pyruvate transaminase; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.889
AGI22033.1
COG1012 NAD-dependent aldehyde dehydrogenases.
  
  
 0.604
AGI22030.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.559
AGI25889.1
COG0477 Permeases of the major facilitator superfamily.
 
     0.536
AGI23154.1
COG2259 Predicted membrane protein.
 
     0.479
AGI26889.1
Carnitine dehydrogenase; COG0824 Predicted thioesterase.
  
     0.451
AGI24182.1
GABA permease; COG1113 Gamma-aminobutyrate permease and related permeases.
  
  
 0.431
AGI26383.1
GABA permease; COG1113 Gamma-aminobutyrate permease and related permeases.
  
  
 0.431
AGI24804.1
Transcriptional regulator domain-containing protein; COG3710 DNA-binding winged-HTH domains.
  
   
 0.423
AGI26221.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
  
 0.400
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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