Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22036.1 | AGI22037.1 | H681_00770 | H681_00775 | Hypothetical protein; COG2199 FOG: GGDEF domain. | Hypothetical protein. | 0.883 |
AGI22036.1 | AGI22038.1 | H681_00770 | H681_00780 | Hypothetical protein; COG2199 FOG: GGDEF domain. | Hypothetical protein; COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family. | 0.815 |
AGI22036.1 | AGI22039.1 | H681_00770 | H681_00785 | Hypothetical protein; COG2199 FOG: GGDEF domain. | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | 0.864 |
AGI22036.1 | AGI22722.1 | H681_00770 | H681_04200 | Hypothetical protein; COG2199 FOG: GGDEF domain. | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | 0.569 |
AGI22036.1 | AGI23453.1 | H681_00770 | H681_07885 | Hypothetical protein; COG2199 FOG: GGDEF domain. | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 0.520 |
AGI22036.1 | AGI26862.1 | H681_00770 | H681_24975 | Hypothetical protein; COG2199 FOG: GGDEF domain. | Two-component sensor; COG0642 Signal transduction histidine kinase. | 0.529 |
AGI22037.1 | AGI22036.1 | H681_00775 | H681_00770 | Hypothetical protein. | Hypothetical protein; COG2199 FOG: GGDEF domain. | 0.883 |
AGI22037.1 | AGI22038.1 | H681_00775 | H681_00780 | Hypothetical protein. | Hypothetical protein; COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family. | 0.993 |
AGI22037.1 | AGI22039.1 | H681_00775 | H681_00785 | Hypothetical protein. | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | 0.964 |
AGI22038.1 | AGI22036.1 | H681_00780 | H681_00770 | Hypothetical protein; COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family. | Hypothetical protein; COG2199 FOG: GGDEF domain. | 0.815 |
AGI22038.1 | AGI22037.1 | H681_00780 | H681_00775 | Hypothetical protein; COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family. | Hypothetical protein. | 0.993 |
AGI22038.1 | AGI22039.1 | H681_00780 | H681_00785 | Hypothetical protein; COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family. | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | 0.979 |
AGI22039.1 | AGI22036.1 | H681_00785 | H681_00770 | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | Hypothetical protein; COG2199 FOG: GGDEF domain. | 0.864 |
AGI22039.1 | AGI22037.1 | H681_00785 | H681_00775 | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | Hypothetical protein. | 0.964 |
AGI22039.1 | AGI22038.1 | H681_00785 | H681_00780 | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | Hypothetical protein; COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family. | 0.979 |
AGI22039.1 | AGI22722.1 | H681_00785 | H681_04200 | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | 0.795 |
AGI22039.1 | AGI23453.1 | H681_00785 | H681_07885 | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 0.755 |
AGI22039.1 | AGI23658.1 | H681_00785 | H681_08920 | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | Antisigma-factor antagonist STAS domain-containing protein; COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor). | 0.695 |
AGI22039.1 | AGI24958.1 | H681_00785 | H681_15450 | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor). | 0.695 |
AGI22039.1 | AGI26862.1 | H681_00785 | H681_24975 | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | Two-component sensor; COG0642 Signal transduction histidine kinase. | 0.755 |
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