Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22043.1 | AGI22044.1 | H681_00805 | H681_00810 | Aerotaxis transducer Aer2; COG2202 FOG: PAS/PAC domain. | COG0835 Chemotaxis signal transduction protein. | 0.990 |
AGI22043.1 | AGI22045.1 | H681_00805 | H681_00815 | Aerotaxis transducer Aer2; COG2202 FOG: PAS/PAC domain. | Putative two-component sensor; COG0643 Chemotaxis protein histidine kinase and related kinases. | 0.991 |
AGI22043.1 | AGI22046.1 | H681_00805 | H681_00820 | Aerotaxis transducer Aer2; COG2202 FOG: PAS/PAC domain. | Two-component response regulator; COG0784 FOG: CheY-like receiver. | 0.964 |
AGI22043.1 | AGI22047.1 | H681_00805 | H681_00825 | Aerotaxis transducer Aer2; COG2202 FOG: PAS/PAC domain. | Putative chemotaxis transducer; COG0840 Methyl-accepting chemotaxis protein. | 0.565 |
AGI22043.1 | AGI23626.1 | H681_00805 | H681_08760 | Aerotaxis transducer Aer2; COG2202 FOG: PAS/PAC domain. | COG0835 Chemotaxis signal transduction protein. | 0.925 |
AGI22043.1 | AGI23689.1 | H681_00805 | H681_09075 | Aerotaxis transducer Aer2; COG2202 FOG: PAS/PAC domain. | Two-component response regulator CheY; COG0784 FOG: CheY-like receiver. | 0.828 |
AGI22043.1 | AGI23697.1 | H681_00805 | H681_09115 | Aerotaxis transducer Aer2; COG2202 FOG: PAS/PAC domain. | COG0835 Chemotaxis signal transduction protein. | 0.972 |
AGI22043.1 | AGI25129.1 | H681_00805 | H681_16305 | Aerotaxis transducer Aer2; COG2202 FOG: PAS/PAC domain. | CheW protein; COG0835 Chemotaxis signal transduction protein. | 0.901 |
AGI22043.1 | cheB | H681_00805 | H681_00790 | Aerotaxis transducer Aer2; COG2202 FOG: PAS/PAC domain. | Chemotaxis-specific methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.962 |
AGI22043.1 | cheB-2 | H681_00805 | H681_09090 | Aerotaxis transducer Aer2; COG2202 FOG: PAS/PAC domain. | Chemotaxis-specific protein-glutamate methyltransferase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.933 |
AGI22044.1 | AGI22043.1 | H681_00810 | H681_00805 | COG0835 Chemotaxis signal transduction protein. | Aerotaxis transducer Aer2; COG2202 FOG: PAS/PAC domain. | 0.990 |
AGI22044.1 | AGI22045.1 | H681_00810 | H681_00815 | COG0835 Chemotaxis signal transduction protein. | Putative two-component sensor; COG0643 Chemotaxis protein histidine kinase and related kinases. | 0.998 |
AGI22044.1 | AGI22046.1 | H681_00810 | H681_00820 | COG0835 Chemotaxis signal transduction protein. | Two-component response regulator; COG0784 FOG: CheY-like receiver. | 0.983 |
AGI22044.1 | AGI22047.1 | H681_00810 | H681_00825 | COG0835 Chemotaxis signal transduction protein. | Putative chemotaxis transducer; COG0840 Methyl-accepting chemotaxis protein. | 0.985 |
AGI22044.1 | AGI23626.1 | H681_00810 | H681_08760 | COG0835 Chemotaxis signal transduction protein. | COG0835 Chemotaxis signal transduction protein. | 0.820 |
AGI22044.1 | AGI23689.1 | H681_00810 | H681_09075 | COG0835 Chemotaxis signal transduction protein. | Two-component response regulator CheY; COG0784 FOG: CheY-like receiver. | 0.918 |
AGI22044.1 | AGI23697.1 | H681_00810 | H681_09115 | COG0835 Chemotaxis signal transduction protein. | COG0835 Chemotaxis signal transduction protein. | 0.912 |
AGI22044.1 | AGI25129.1 | H681_00810 | H681_16305 | COG0835 Chemotaxis signal transduction protein. | CheW protein; COG0835 Chemotaxis signal transduction protein. | 0.791 |
AGI22044.1 | cheB | H681_00810 | H681_00790 | COG0835 Chemotaxis signal transduction protein. | Chemotaxis-specific methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.972 |
AGI22044.1 | cheB-2 | H681_00810 | H681_09090 | COG0835 Chemotaxis signal transduction protein. | Chemotaxis-specific protein-glutamate methyltransferase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.957 |
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