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AGI22083.1 AGI22083.1 znuC znuC AGI22081.1 AGI22081.1 AGI22084.1 AGI22084.1 AGI22080.1 AGI22080.1 rpoA rpoA AGI24249.1 AGI24249.1 gltB gltB birA birA polA polA AGI22078.1 AGI22078.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI22083.1Transcriptional regulator np20; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family. (168 aa)    
Predicted Functional Partners:
znuC
Zinc transporter; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
 0.965
AGI22081.1
ABC zinc transporter permease ZnuB; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
 
  
 0.907
AGI22084.1
Putative adhesin; COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin.
 
  
 0.816
AGI22080.1
Lipoprotein; COG0459 Chaperonin GroEL (HSP60 family).
     
 0.709
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.609
AGI24249.1
COG2345 Predicted transcriptional regulator.
  
    0.607
gltB
COG0067 Glutamate synthase domain 1.
     
 0.563
birA
Bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
     
 0.537
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.527
AGI22078.1
ABC transporter permease; COG2011 ABC-type metal ion transport system, permease component.
 
     0.524
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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