STRINGSTRING
AGI22093.1 AGI22093.1 AGI22094.1 AGI22094.1 AGI22095.1 AGI22095.1 AGI22092.1 AGI22092.1 AGI22991.1 AGI22991.1 AGI25595.1 AGI25595.1 AGI25641.1 AGI25641.1 ftsQ ftsQ AGI22965.1 AGI22965.1 dsbB dsbB lptA lptA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22093.1Thiol:disulfide interchange protein DsbA; COG0526 Thiol-disulfide isomerase and thioredoxins. (213 aa)    
Predicted Functional Partners:
AGI22094.1
Hydrolase; COG3568 Metal-dependent hydrolase.
       0.781
AGI22095.1
Diguanylate cyclase; COG2199 FOG: GGDEF domain.
       0.781
AGI22092.1
COG2863 Cytochrome c553.
 
     0.729
AGI22991.1
ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B.
  
   
 0.720
AGI25595.1
Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
 
  
 0.703
AGI25641.1
COG2976 Uncharacterized protein conserved in bacteria.
  
     0.649
ftsQ
Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.
  
     0.633
AGI22965.1
Toluene tolerance protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 
   0.627
dsbB
Disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.
 
  
 0.596
lptA
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
 
     0.581
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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