Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22114.1 | AGI22115.1 | H681_01160 | H681_01165 | COG3613 Nucleoside 2-deoxyribosyltransferase. | cpaA protein; COG0387 Ca2+/H+ antiporter. | 0.795 |
AGI22114.1 | AGI22116.1 | H681_01160 | H681_01170 | COG3613 Nucleoside 2-deoxyribosyltransferase. | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | 0.543 |
AGI22115.1 | AGI22114.1 | H681_01165 | H681_01160 | cpaA protein; COG0387 Ca2+/H+ antiporter. | COG3613 Nucleoside 2-deoxyribosyltransferase. | 0.795 |
AGI22115.1 | AGI22116.1 | H681_01165 | H681_01170 | cpaA protein; COG0387 Ca2+/H+ antiporter. | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | 0.576 |
AGI22116.1 | AGI22114.1 | H681_01170 | H681_01160 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | COG3613 Nucleoside 2-deoxyribosyltransferase. | 0.543 |
AGI22116.1 | AGI22115.1 | H681_01170 | H681_01165 | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | cpaA protein; COG0387 Ca2+/H+ antiporter. | 0.576 |