Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22213.1 | AGI22214.1 | H681_01655 | H681_01660 | COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold. | 0.563 |
AGI22213.1 | AGI22215.1 | H681_01655 | H681_01665 | COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | Hypothetical protein. | 0.400 |
AGI22214.1 | AGI22213.1 | H681_01660 | H681_01655 | COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold. | COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.563 |
AGI22214.1 | AGI22215.1 | H681_01660 | H681_01665 | COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold. | Hypothetical protein. | 0.554 |
AGI22214.1 | AGI25015.1 | H681_01660 | H681_15735 | COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold. | acyl-CoA thioesterase I; COG2755 Lysophospholipase L1 and related esterases. | 0.440 |
AGI22215.1 | AGI22213.1 | H681_01665 | H681_01655 | Hypothetical protein. | COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.400 |
AGI22215.1 | AGI22214.1 | H681_01665 | H681_01660 | Hypothetical protein. | COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold. | 0.554 |
AGI25015.1 | AGI22214.1 | H681_15735 | H681_01660 | acyl-CoA thioesterase I; COG2755 Lysophospholipase L1 and related esterases. | COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold. | 0.440 |