STRINGSTRING
AGI22270.1 AGI22270.1 AGI22269.1 AGI22269.1 AGI22268.1 AGI22268.1 AGI22733.1 AGI22733.1 AGI22734.1 AGI22734.1 AGI24980.1 AGI24980.1 AGI26330.1 AGI26330.1 AGI24461.1 AGI24461.1 AGI24751.1 AGI24751.1 AGI24750.1 AGI24750.1 AGI25979.1 AGI25979.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22270.1COG1538 Outer membrane protein. (482 aa)    
Predicted Functional Partners:
AGI22269.1
RND multidrug efflux transporter MexB; COG0841 Cation/multidrug efflux pump.
 0.995
AGI22268.1
Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexA precursor; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.992
AGI22733.1
RND family efflux transporter MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.966
AGI22734.1
Hydrophobe/amphiphile efflux-1 (HAE1) family protein; COG0841 Cation/multidrug efflux pump.
 0.947
AGI24980.1
COG1538 Outer membrane protein.
     
 0.904
AGI26330.1
COG1538 Outer membrane protein.
     
0.904
AGI24461.1
COG1538 Outer membrane protein.
     
  0.900
AGI24751.1
Hydrophobe/amphiphile efflux-1 protein; COG0841 Cation/multidrug efflux pump.
 
 0.873
AGI24750.1
Secretion protein HlyD; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.864
AGI25979.1
COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.855
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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