Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22298.1 | AGI22299.1 | H681_02080 | H681_02085 | Protease; COG4784 Putative Zn-dependent protease. | COG0281 Malic enzyme. | 0.577 |
AGI22298.1 | AGI22300.1 | H681_02080 | H681_02090 | Protease; COG4784 Putative Zn-dependent protease. | COG1030 Membrane-bound serine protease (ClpP class). | 0.468 |
AGI22298.1 | AGI22301.1 | H681_02080 | H681_02095 | Protease; COG4784 Putative Zn-dependent protease. | Putative stomatin-like protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs. | 0.457 |
AGI22299.1 | AGI22298.1 | H681_02085 | H681_02080 | COG0281 Malic enzyme. | Protease; COG4784 Putative Zn-dependent protease. | 0.577 |
AGI22299.1 | AGI22300.1 | H681_02085 | H681_02090 | COG0281 Malic enzyme. | COG1030 Membrane-bound serine protease (ClpP class). | 0.496 |
AGI22299.1 | AGI22301.1 | H681_02085 | H681_02095 | COG0281 Malic enzyme. | Putative stomatin-like protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs. | 0.535 |
AGI22300.1 | AGI22298.1 | H681_02090 | H681_02080 | COG1030 Membrane-bound serine protease (ClpP class). | Protease; COG4784 Putative Zn-dependent protease. | 0.468 |
AGI22300.1 | AGI22299.1 | H681_02090 | H681_02085 | COG1030 Membrane-bound serine protease (ClpP class). | COG0281 Malic enzyme. | 0.496 |
AGI22300.1 | AGI22301.1 | H681_02090 | H681_02095 | COG1030 Membrane-bound serine protease (ClpP class). | Putative stomatin-like protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs. | 0.965 |
AGI22300.1 | AGI22302.1 | H681_02090 | H681_02100 | COG1030 Membrane-bound serine protease (ClpP class). | Hypothetical protein; COG0671 Membrane-associated phospholipid phosphatase. | 0.539 |
AGI22300.1 | AGI22303.1 | H681_02090 | H681_02105 | COG1030 Membrane-bound serine protease (ClpP class). | Periplasmic transport system; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | 0.414 |
AGI22300.1 | AGI24511.1 | H681_02090 | H681_13205 | COG1030 Membrane-bound serine protease (ClpP class). | Transmembrane regulator PrtR; COG5662 Predicted transmembrane transcriptional regulator (anti-sigma factor). | 0.411 |
AGI22300.1 | AGI26293.1 | H681_02090 | H681_22130 | COG1030 Membrane-bound serine protease (ClpP class). | Protease subunit HflC; HflC and HflK could regulate a protease. | 0.445 |
AGI22300.1 | AGI26294.1 | H681_02090 | H681_22135 | COG1030 Membrane-bound serine protease (ClpP class). | Protease subunit HflK; HflC and HflK could encode or regulate a protease. | 0.435 |
AGI22300.1 | AGI26570.1 | H681_02090 | H681_23515 | COG1030 Membrane-bound serine protease (ClpP class). | HflC/HflK family protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs. | 0.405 |
AGI22300.1 | AGI26571.1 | H681_02090 | H681_23520 | COG1030 Membrane-bound serine protease (ClpP class). | Nodulation efficiency protein D (NfeD) family protein; COG1585 Membrane protein implicated in regulation of membrane protease activity. | 0.538 |
AGI22301.1 | AGI22298.1 | H681_02095 | H681_02080 | Putative stomatin-like protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs. | Protease; COG4784 Putative Zn-dependent protease. | 0.457 |
AGI22301.1 | AGI22299.1 | H681_02095 | H681_02085 | Putative stomatin-like protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs. | COG0281 Malic enzyme. | 0.535 |
AGI22301.1 | AGI22300.1 | H681_02095 | H681_02090 | Putative stomatin-like protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs. | COG1030 Membrane-bound serine protease (ClpP class). | 0.965 |
AGI22301.1 | AGI22302.1 | H681_02095 | H681_02100 | Putative stomatin-like protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs. | Hypothetical protein; COG0671 Membrane-associated phospholipid phosphatase. | 0.539 |
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