STRINGSTRING
AGI22300.1 AGI22300.1 AGI22301.1 AGI22301.1 AGI22302.1 AGI22302.1 AGI26571.1 AGI26571.1 AGI22299.1 AGI22299.1 AGI22298.1 AGI22298.1 AGI26293.1 AGI26293.1 AGI26294.1 AGI26294.1 AGI22303.1 AGI22303.1 AGI24511.1 AGI24511.1 AGI26570.1 AGI26570.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22300.1COG1030 Membrane-bound serine protease (ClpP class). (447 aa)    
Predicted Functional Partners:
AGI22301.1
Putative stomatin-like protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
 
  
 0.965
AGI22302.1
Hypothetical protein; COG0671 Membrane-associated phospholipid phosphatase.
       0.539
AGI26571.1
Nodulation efficiency protein D (NfeD) family protein; COG1585 Membrane protein implicated in regulation of membrane protease activity.
  
  
 0.538
AGI22299.1
COG0281 Malic enzyme.
       0.496
AGI22298.1
Protease; COG4784 Putative Zn-dependent protease.
 
     0.468
AGI26293.1
Protease subunit HflC; HflC and HflK could regulate a protease.
 
  
 0.445
AGI26294.1
Protease subunit HflK; HflC and HflK could encode or regulate a protease.
 
  
 0.435
AGI22303.1
Periplasmic transport system; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.414
AGI24511.1
Transmembrane regulator PrtR; COG5662 Predicted transmembrane transcriptional regulator (anti-sigma factor).
 
  
 0.411
AGI26570.1
HflC/HflK family protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
  
 0.405
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (18%) [HD]