STRINGSTRING
AGI22304.1 AGI22304.1 AGI25922.1 AGI25922.1 AGI24364.1 AGI24364.1 AGI25792.1 AGI25792.1 AGI23787.1 AGI23787.1 AGI21936.1 AGI21936.1 AGI22335.1 AGI22335.1 AGI25696.1 AGI25696.1 AGI22305.1 AGI22305.1 AGI26374.1 AGI26374.1 sprT sprT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22304.1COG1289 Predicted membrane protein. (731 aa)    
Predicted Functional Partners:
AGI25922.1
Transcriptional regulator MvaT, P16 subunit.
  
     0.665
AGI24364.1
Transcriptional regulator MvaV; COG4992 Ornithine/acetylornithine aminotransferase.
  
     0.660
AGI25792.1
Putative regulatory protein; COG0776 Bacterial nucleoid DNA-binding protein.
  
     0.659
AGI23787.1
Transcriptional regulator.
  
     0.658
AGI21936.1
Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
  
     0.647
AGI22335.1
Hypothetical protein.
  
     0.580
AGI25696.1
COG3081 Nucleoid-associated protein.
  
     0.579
AGI22305.1
COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.
       0.516
AGI26374.1
Hypothetical protein; COG3264 Small-conductance mechanosensitive channel.
  
     0.507
sprT
COG3091 Uncharacterized protein conserved in bacteria; Belongs to the SprT family.
  
     0.504
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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