STRINGSTRING
AGI22315.1 AGI22315.1 AGI22314.1 AGI22314.1 AGI22316.1 AGI22316.1 AGI22317.1 AGI22317.1 AGI26457.1 AGI26457.1 AGI22313.1 AGI22313.1 AGI26456.1 AGI26456.1 AGI25927.1 AGI25927.1 AGI25926.1 AGI25926.1 AGI25930.1 AGI25930.1 AGI22797.1 AGI22797.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22315.1COG4452 Inner membrane protein involved in colicin E2 resistance. (480 aa)    
Predicted Functional Partners:
AGI22314.1
COG0642 Signal transduction histidine kinase.
 
   
 0.909
AGI22316.1
Hypothetical protein.
       0.769
AGI22317.1
Hypothetical protein.
       0.752
AGI26457.1
COG5373 Predicted membrane protein.
  
     0.735
AGI22313.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
   
 0.706
AGI26456.1
Hypothetical protein.
  
     0.649
AGI25927.1
Hypothetical protein.
  
     0.567
AGI25926.1
COG1300 Uncharacterized membrane protein.
  
     0.559
AGI25930.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
  
     0.522
AGI22797.1
Hypothetical protein.
  
     0.516
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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