Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22318.1 | AGI22319.1 | H681_02180 | H681_02185 | COG0625 Glutathione S-transferase. | Streptogramin lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.822 |
AGI22318.1 | AGI22320.1 | H681_02180 | H681_02190 | COG0625 Glutathione S-transferase. | Hypothetical protein. | 0.528 |
AGI22318.1 | AGI23851.1 | H681_02180 | H681_09885 | COG0625 Glutathione S-transferase. | Hypothetical protein. | 0.473 |
AGI22318.1 | gltX | H681_02180 | H681_16790 | COG0625 Glutathione S-transferase. | glutamyl-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.409 |
AGI22318.1 | lysS | H681_02180 | H681_18460 | COG0625 Glutathione S-transferase. | COG1190 Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.473 |
AGI22318.1 | rpoA | H681_02180 | H681_02900 | COG0625 Glutathione S-transferase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.555 |
AGI22318.1 | rpoB | H681_02180 | H681_02740 | COG0625 Glutathione S-transferase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.465 |
AGI22318.1 | rpoC | H681_02180 | H681_02745 | COG0625 Glutathione S-transferase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.416 |
AGI22319.1 | AGI22318.1 | H681_02185 | H681_02180 | Streptogramin lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | COG0625 Glutathione S-transferase. | 0.822 |
AGI22319.1 | AGI22320.1 | H681_02185 | H681_02190 | Streptogramin lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | Hypothetical protein. | 0.555 |
AGI22320.1 | AGI22318.1 | H681_02190 | H681_02180 | Hypothetical protein. | COG0625 Glutathione S-transferase. | 0.528 |
AGI22320.1 | AGI22319.1 | H681_02190 | H681_02185 | Hypothetical protein. | Streptogramin lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.555 |
AGI23851.1 | AGI22318.1 | H681_09885 | H681_02180 | Hypothetical protein. | COG0625 Glutathione S-transferase. | 0.473 |
AGI23851.1 | gltX | H681_09885 | H681_16790 | Hypothetical protein. | glutamyl-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.714 |
AGI23851.1 | rpoA | H681_09885 | H681_02900 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.476 |
AGI23851.1 | rpoB | H681_09885 | H681_02740 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.503 |
AGI23851.1 | rpoC | H681_09885 | H681_02745 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.431 |
gltX | AGI22318.1 | H681_16790 | H681_02180 | glutamyl-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | COG0625 Glutathione S-transferase. | 0.409 |
gltX | AGI23851.1 | H681_16790 | H681_09885 | glutamyl-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | Hypothetical protein. | 0.714 |
gltX | lysS | H681_16790 | H681_18460 | glutamyl-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | COG1190 Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.773 |
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