STRINGSTRING
AGI22324.1 AGI22324.1 AGI24146.1 AGI24146.1 AGI24145.1 AGI24145.1 AGI24150.1 AGI24150.1 AGI24144.1 AGI24144.1 AGI24152.1 AGI24152.1 AGI24088.1 AGI24088.1 AGI24089.1 AGI24089.1 AGI22322.1 AGI22322.1 AGI22323.1 AGI22323.1 apaH apaH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGI22324.1COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (95 aa)    
Predicted Functional Partners:
AGI24146.1
Catechol 1,2-dioxygenase; COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
   
 0.650
AGI24145.1
COG4829 Muconolactone delta-isomerase.
 
  
 0.637
AGI24150.1
3-carboxy-cis,cis-muconate cycloisomerase; COG0015 Adenylosuccinate lyase.
 
  
 0.563
AGI24144.1
Muconate cycloisomerase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.545
AGI24152.1
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
  
 0.539
AGI24088.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
   
 0.510
AGI24089.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
   
 0.501
AGI22322.1
COG3712 Fe2+-dicitrate sensor, membrane component.
       0.471
AGI22323.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
       0.471
apaH
Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
 0.469
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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