STRINGSTRING
AGI22340.1 AGI22340.1 AGI22341.1 AGI22341.1 AGI22908.1 AGI22908.1 pxpA pxpA AGI22339.1 AGI22339.1 ureC ureC ureB ureB pxpA-2 pxpA-2 ureA ureA AGI22338.1 AGI22338.1 AGI22336.1 AGI22336.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGI22340.1Hypothetical protein; COG2049 Allophanate hydrolase subunit 1. (292 aa)    
Predicted Functional Partners:
AGI22341.1
COG1984 Allophanate hydrolase subunit 2.
 
 0.998
AGI22908.1
Allophanate hydrolase/urea amidolyase-like protein; COG1984 Allophanate hydrolase subunit 2.
 
 0.980
pxpA
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
  
 0.959
AGI22339.1
COG0439 Biotin carboxylase.
 
    0.942
ureC
Urease subunit alpha; COG0804 Urea amidohydrolase (urease) alpha subunit.
     
 0.908
ureB
Urease subunit beta; COG0832 Urea amidohydrolase (urease) beta subunit; Belongs to the urease beta subunit family.
     
 0.906
pxpA-2
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
  
 0.905
ureA
Urease subunit gamma; COG0831 Urea amidohydrolase (urease) gamma subunit; Belongs to the urease gamma subunit family.
     
 0.902
AGI22338.1
Hypothetical protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
    0.872
AGI22336.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.713
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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