STRINGSTRING
AGI22342.1 AGI22342.1 AGI24754.1 AGI24754.1 AGI22340.1 AGI22340.1 pyrB pyrB AGI26679.1 AGI26679.1 AGI25169.1 AGI25169.1 pyrC-2 pyrC-2 AGI24465.1 AGI24465.1 bioB bioB AGI22341.1 AGI22341.1 carB carB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AGI22342.1Hypothetical protein. (413 aa)    
Predicted Functional Partners:
AGI24754.1
Hypothetical protein; COG3450 Predicted enzyme of the cupin superfamily.
  
     0.683
AGI22340.1
Hypothetical protein; COG2049 Allophanate hydrolase subunit 1.
 
     0.531
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.523
AGI26679.1
Phosphorylcholine phosphatase; COG2217 Cation transport ATPase.
  
     0.501
AGI25169.1
Hypothetical protein; COG3450 Predicted enzyme of the cupin superfamily.
  
     0.485
pyrC-2
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
   
    0.481
AGI24465.1
COG0402 Cytosine deaminase and related metal-dependent hydrolases.
  
  
 0.479
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
       0.476
AGI22341.1
COG1984 Allophanate hydrolase subunit 2.
       0.472
carB
COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the CarB family.
   
    0.472
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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