STRINGSTRING
AGI22359.1 AGI22359.1 AGI22358.1 AGI22358.1 AGI22919.1 AGI22919.1 AGI25215.1 AGI25215.1 AGI22360.1 AGI22360.1 AGI22357.1 AGI22357.1 AGI26686.1 AGI26686.1 AGI25361.1 AGI25361.1 AGI23106.1 AGI23106.1 AGI26858.1 AGI26858.1 AGI24961.1 AGI24961.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22359.1Cupin; COG1396 Predicted transcriptional regulators. (183 aa)    
Predicted Functional Partners:
AGI22358.1
Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
  
 0.884
AGI22919.1
COG1396 Predicted transcriptional regulators.
  
  
 0.788
AGI25215.1
DNA-binding protein; COG1396 Predicted transcriptional regulators.
  
  
 0.713
AGI22360.1
COG0174 Glutamine synthetase.
  
  
 0.620
AGI22357.1
Hypothetical protein; COG4705 Uncharacterized membrane-anchored protein conserved in bacteria.
       0.500
AGI26686.1
COG1396 Predicted transcriptional regulators.
 
 
0.493
AGI25361.1
COG2188 Transcriptional regulators.
 
  
 0.482
AGI23106.1
Glutamine amidopeptidase (class I); COG2071 Predicted glutamine amidotransferases.
 
  
 0.470
AGI26858.1
COG1396 Predicted transcriptional regulators.
 
 
0.458
AGI24961.1
COG2188 Transcriptional regulators.
 
  
 0.457
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.